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Resource NamingSystem/FHIR Server from package hl7.terminology#current (31 ms)

Package hl7.terminology
Type NamingSystem
Id Id
FHIR Version R5
Source http://terminology.hl7.org/https://build.fhir.org/ig/HL7/UTG/NamingSystem-v3-refSeq.html
Url http://terminology.hl7.org/NamingSystem/v3-refSeq
Version 2.1.0
Status retired
Date 2021-11-09T10:00:00+10:00
Name RefSeq
Title Gene Reference Sequence Collection
Experimental False
Realm uv
Authority hl7
Description The Reference Sequence (RefSeq) is one of the NCBI projects, the RefSeq collection aims to provide a comprehensive, integrated, non-redundant, well-annotated set of sequences, including genomic DNA, transcripts, and proteins. ReqSeq is accessible via BLAST, Entrez, and the NCBI FTP site. Information is also available in Entrez Genomes and Entrez Gene, and for some genomes additional information is available in the Map Viewer. RefSeq entries can be used with the HL7 coded data type. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, RefSeq entries can be used to as the observation values for genomic reference sequence identifiers (LOINC \#: 48013-7). More information may be found at: http://www.ncbi.nlm.nih.gov/RefSeq Versioning informaiton: The latest release of RefSeq was released on May 13, 2009 with the release number of 35. RefSeq generates new releases roughly every two months. The dates of the three previous releases were: Release 34, March 12, 2009 Release 33, January 20, 2009 Release 32, November 17, 2008 RefSeq is a free database for the public.
Kind codesystem

Resources that use this resource

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Resources that this resource uses

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: NamingSystem v3-refSeq

Summary

Defining URLhttp://terminology.hl7.org/NamingSystem/v3-refSeq
Version2.1.0
NameRefSeq
TitleGene Reference Sequence Collection
Statusretired
Definition

The Reference Sequence (RefSeq) is one of the NCBI projects, the RefSeq collection aims to provide a comprehensive, integrated, non-redundant, well-annotated set of sequences, including genomic DNA, transcripts, and proteins. ReqSeq is accessible via BLAST, Entrez, and the NCBI FTP site. Information is also available in Entrez Genomes and Entrez Gene, and for some genomes additional information is available in the Map Viewer.

RefSeq entries can be used with the HL7 coded data type. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, RefSeq entries can be used to as the observation values for genomic reference sequence identifiers (LOINC #: 48013-7).

More information may be found at: http://www.ncbi.nlm.nih.gov/RefSeq

Versioning informaiton: The latest release of RefSeq was released on May 13, 2009 with the release number of 35.

RefSeq generates new releases roughly every two months. The dates of the three previous releases were: Release 34, March 12, 2009 Release 33, January 20, 2009 Release 32, November 17, 2008

RefSeq is a free database for the public.

PublisherNCBI

Identifiers

TypeValuePreferred
OID2.16.840.1.113883.6.280true
URIhttp://www.ncbi.nlm.nih.gov/refseqtrue

Source

{
  "resourceType" : "NamingSystem",
  "id" : "v3-refSeq",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: NamingSystem v3-refSeq</b></p><a name=\"v3-refSeq\"> </a><a name=\"hcv3-refSeq\"> </a><a name=\"v3-refSeq-en-US\"> </a><h3>Summary</h3><table class=\"grid\"><tr><td>Defining URL</td><td>http://terminology.hl7.org/NamingSystem/v3-refSeq</td></tr><tr><td>Version</td><td>2.1.0</td></tr><tr><td>Name</td><td>RefSeq</td></tr><tr><td>Title</td><td>Gene Reference Sequence Collection</td></tr><tr><td>Status</td><td>retired</td></tr><tr><td>Definition</td><td><div><p>The Reference Sequence (RefSeq) is one of the NCBI projects, the RefSeq collection aims to provide a comprehensive, integrated, non-redundant, well-annotated set of sequences, including genomic DNA, transcripts, and proteins. ReqSeq is accessible via BLAST, Entrez, and the NCBI FTP site. Information is also available in Entrez Genomes and Entrez Gene, and for some genomes additional information is available in the Map Viewer.</p>\n<p>RefSeq entries can be used with the HL7 coded data type. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, RefSeq entries can be used to as the observation values for genomic reference sequence identifiers (LOINC #: 48013-7).</p>\n<p>More information may be found at: http://www.ncbi.nlm.nih.gov/RefSeq</p>\n<p>Versioning informaiton: The latest release of RefSeq was released on May 13, 2009 with the release number of 35.</p>\n<p>RefSeq generates new releases roughly every two months. The dates of the three previous releases were: Release 34, March 12, 2009 Release 33, January 20, 2009 Release 32, November 17, 2008</p>\n<p>RefSeq is a free database for the public.</p>\n</div></td></tr><tr><td>Publisher</td><td>NCBI</td></tr></table><h3>Identifiers</h3><table class=\"grid\"><tr><td><b>Type</b></td><td><b>Value</b></td><td><b>Preferred</b></td></tr><tr><td>OID</td><td>2.16.840.1.113883.6.280</td><td>true</td></tr><tr><td>URI</td><td>http://www.ncbi.nlm.nih.gov/refseq</td><td>true</td></tr></table></div>"
  },
  "url" : "http://terminology.hl7.org/NamingSystem/v3-refSeq",
  "version" : "2.1.0",
  "name" : "RefSeq",
  "title" : "Gene Reference Sequence Collection",
  "status" : "retired",
  "kind" : "codesystem",
  "date" : "2021-11-09T10:00:00+10:00",
  "publisher" : "NCBI",
  "contact" : [
    {
      "name" : "National Center for Biotechnology Information,National Center for Biotechnology Information"
    }
  ],
  "responsible" : "NCBI",
  "description" : "The Reference Sequence (RefSeq) is one of the NCBI projects, the RefSeq collection aims to provide a comprehensive, integrated, non-redundant, well-annotated set of sequences, including genomic DNA, transcripts, and proteins. ReqSeq is accessible via BLAST, Entrez, and the NCBI FTP site. Information is also available in Entrez Genomes and Entrez Gene, and for some genomes additional information is available in the Map Viewer.\r\n\r\nRefSeq entries can be used with the HL7 coded data type. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, RefSeq entries can be used to as the observation values for genomic reference sequence identifiers (LOINC \\#: 48013-7).\r\n\r\nMore information may be found at: http://www.ncbi.nlm.nih.gov/RefSeq\r\n\r\nVersioning informaiton: The latest release of RefSeq was released on May 13, 2009 with the release number of 35.\r\n\r\nRefSeq generates new releases roughly every two months. The dates of the three previous releases were: Release 34, March 12, 2009 Release 33, January 20, 2009 Release 32, November 17, 2008\r\n\r\nRefSeq is a free database for the public.",
  "uniqueId" : [
    {
      "type" : "oid",
      "value" : "2.16.840.1.113883.6.280",
      "preferred" : true
    },
    {
      "type" : "uri",
      "value" : "http://www.ncbi.nlm.nih.gov/refseq",
      "preferred" : true
    }
  ]
}

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